Browse of TCMCG007C17867 protein

CDS

Accession Number	TCMCG007C17867
gbkey	CDS
Protein Id	XP_009131887.1
Location	complement(join(4502504..4502626,4502717..4502815,4502946..4503017,4503117..4503210,4503292..4503492,4503574..4503855,4503960..4504072,4504131..4504230,4504316..4504438,4504524..4504591,4504687..4504842,4504959..4505105,4505201..4505470,4505564..4505648,4505725..4505876,4505946..4506086,4506174..4506227,4506378..4506513,4506607..4506740,4506808..4507341))
Gene	LOC103856528
GeneID	103856528
Organism	Brassica rapa

Protein

Length	1027aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009133639.3
Definition	DNA repair protein RAD5A [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	L
Description	HIRAN
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K15505        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000724        [VIEW IN EMBL-EBI] GO:0000725        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006281        [VIEW IN EMBL-EBI] GO:0006302        [VIEW IN EMBL-EBI] GO:0006310        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006974        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009292        [VIEW IN EMBL-EBI] GO:0009294        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0033554        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044764        [VIEW IN EMBL-EBI] GO:0045003        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051704        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGGGACGAAAGTTTCAGACCATCTGCTCTCCACCGTCAGATCAGTCGTGGGATCCGATTACTCAGACATGGACATAATCAGAGCCCTTCACATGGCGAATCTCGATCCCACGGCTGCCATCAATATAATCTTCGACACTCCCAGTTTCAGCAAACCTAACGATATAGCCGCCGCCGCCGCCGCCGCTAATTCTACTCCGAGGGGGGTTAATGGAGGGAAGAGAATGGAGGACGGCTTAAAGGTCTGTCCTTTTAGTGAAGGAGCAGCGAACCATCATCGCGTGGAGGAAGAAGTAGATGAGAGTGTTTCAGGGGATGAGTGTTGGTGGTTCGTGGGCTGTTCCGAGTTGTCGGGATTGTCGACGTGTAAAGGAAGGAGATTGAAGGCTGGTGATGAGCTGTTGTTCACGTTTCCGAGTAGTAAAGCGTTAAAGTCCGAGGCTACGATGCCTGGGAAGCGATTTGGAAGGGGGAGGCCAAGTGCGCGTAATGTTTCTGATATCGTCAGGTTCTCTACAAAGGATTCAGGAGAGATTGGTAGGATACCAAATGAGTGGGCTAAGTGTCTTCTACCGCTTGTGAGAGACAAGAAGGTTAGGATAGAAGGGAGATGCAAGTCGGCGCCTGAAGCATTAGGGATTATGGATACCATTCTTCTTTCAGTAAGTGTATACATTAATAGTTCCATGTTTCAAAAGCATAGTGCTACTTCACTTAAGGTAGCCACTAATACGGCAGAGGAATCAACATTCCATCCTCTCCCAAACCTCTTGCGGTTACTTGGTTTGACTCCCTTTAAGAAGGCAGAGTTTACTCCTGAGGATTTGTCTACTCGAAAGCGACCTTTGAGTTCCAAGGATCCCGTTTCTACTTCGTTGCTTCAATTAAACAAGGTCAAGAAGCTTAATCAAGATGCAGAGGGAGATGAAAATGAGCATTGTATCAGCGATGGTGATCTTGATAACATTGTTGGTGTTGGGGACAGTTCTGATTTACAGGAAATGGAAACTCCACGTAAACTTCTGTGTGAGCTTCGTGCGTATCAAAAGCAGGCACTTCACTGGATGACCCAACTGGAGAAAGGACATTGCACTGATGAGGCAGCAACAATGCTTCACCCATGTTGGGAAGCGTACTATCTAGCAGACAAGAGGGAACTTATTATCTACCTGAACTCTTTCACTGGTGATGCTACAATACACTTTCCTAGCACACTTCAAATGGCAAGAGGAGGAATTCTAGCAGACGCAATGGGTCTCGGGAAGACTGTAATGACCATATCCCTCATGCTTGCACATTCATGGAAAGCTGCCTCAACCGGGTTTCAATGCCCAATTAATGAAGGAGACAAAGTGATCAGCAGTTCTTTAGATGAGTGTACTAGTCCTTCAGTGAAGGAAACTAAACTTCCAGGTTTTGATAAGAAGCTTCTGGAACAGCAAAGTGCCCTTGAAAATGGTGGTAACCTCATTATATGTCCGATGACACTTTTAGCCCAGTGGAAGTCAGAGATTGAAATGCATGCTAAGCCTGGGTCCCTATCTGTATATCTCCATTACGGCCCTGACAGGCCAAAGGATGTAAAACTTCTAACCCAGAGTGATGTTGTCATCACCACATATGGGGTTCTAACATCCGAGTTTTTCGCAGAGAACTCAGCCAAGAGTGAAGGACTTTATGCAGTTCGTTGGTTTAGGATTGTTCTTGACGAGGCACATACCATCAAAAACTCAAAAACCCAAGTATCCTTGGCTGCAGCTGCTTTGGTTTCTGATCGACGTTGGTGTCTTACGGGTACTCCTATTCAGAATACTTTGGAGGATTTATATAGCCTTCTACGATTTTTGAGGATTGAACCATGGGGAACTTGGGCATGGTGGAATAAACTTGTCCAAAAGCCATTTGAAGAGGGAGATGAGAGAGGGCTAAAGCTAGTCCAGTCTATCTTAAAACCTATCATGCTTAGGAGAACCAAGTCTAGCACCGATCGAGAAGGACGGCCGATTCTTGTTCTACCACCTGCTGATGCGCGGGTCATTTACTGTGAGCTCTCGGAGTCCGAGAGAGATTTCTACGATGCGCTGTTTAAAAGATCCAAGGTGAAATTTGATCAATTTGTTCAACAAGGGAAAGTTCTTCATAACTATGCTTCGATCCTGGAATTGCTTCTGCGTCTTAGACAGTGTTGTGATCACCCTTTTCTAGTAATGAGTCGAGGTGATACAGCGCAGTACTCTGATCTGAATAAGCTGGCTAAACGTTTTCTTGGTGGAAAATCTTGCGGTCTAGAGAAGGAAGGCAAAGATGTACTACCATCAGTGGCTTTTGTTCAGGAGGTGGTAGAGGAACTGAGCAAAGGAGAGCAAGGAGAGTGTCCAATATGCCTCGAAGCGTTTGAGGATGCCGTTTTAACACCGTGTGCTCATAGATTGTGTCGTGAGTGTCTCTTGGCGAGTTGGAGAAACTCTTCTTCTGGGTTATGTCCTGTGTGTAGGAAAACTGTGAGCAAACAAGAACTCATCACAGCACCAACCGAAAGTAGATTCCAGGTGGACGTGGAGAAGAATTGGGTAGAATCATCCAAAATCACTGCTCTTCTGGAAGAGCTTGAAAGTTTTCGTTCTTCAGGCTCTAAGAGCATTATCTTTAGCCAGTGGACTGCTTTTCTCGATCTCCTCCAAATTCCCCTCTCTCGGAACAACATTTCATTTGTGCGTCTGGATGGTACGCTAAACCAGCAGCAACGAGAGAAAGTCCTTAAAGAGTTTTCTGAAGATGGTAGTATCATGGTAATGTTGATGTCTCTAAAAGCTGGTGGGGTCGGGATAAATCTAACAGCTGCGTCCAATGCTTTTGTCATGGATCCATGGTGGAACCCAGCAGTAGAGGAACAAGCTGTTATGCGTATCCATCGTATAGGACAGACTAAGGAAGTCAAAATCAGAAGATTCATCATTAAGGGAACAGTTGAGGAGAGAATGGAGGCGGTTCAGGCGAGGAAACAGAGAATGATCTCTGGGGCTTTAACCGATCAAGAAGTACGAAGTGCACGTATAGAGGAACTCAAGATGTTGTTTACCTGA

Protein:   MGTKVSDHLLSTVRSVVGSDYSDMDIIRALHMANLDPTAAINIIFDTPSFSKPNDIAAAAAAANSTPRGVNGGKRMEDGLKVCPFSEGAANHHRVEEEVDESVSGDECWWFVGCSELSGLSTCKGRRLKAGDELLFTFPSSKALKSEATMPGKRFGRGRPSARNVSDIVRFSTKDSGEIGRIPNEWAKCLLPLVRDKKVRIEGRCKSAPEALGIMDTILLSVSVYINSSMFQKHSATSLKVATNTAEESTFHPLPNLLRLLGLTPFKKAEFTPEDLSTRKRPLSSKDPVSTSLLQLNKVKKLNQDAEGDENEHCISDGDLDNIVGVGDSSDLQEMETPRKLLCELRAYQKQALHWMTQLEKGHCTDEAATMLHPCWEAYYLADKRELIIYLNSFTGDATIHFPSTLQMARGGILADAMGLGKTVMTISLMLAHSWKAASTGFQCPINEGDKVISSSLDECTSPSVKETKLPGFDKKLLEQQSALENGGNLIICPMTLLAQWKSEIEMHAKPGSLSVYLHYGPDRPKDVKLLTQSDVVITTYGVLTSEFFAENSAKSEGLYAVRWFRIVLDEAHTIKNSKTQVSLAAAALVSDRRWCLTGTPIQNTLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVQQGKVLHNYASILELLLRLRQCCDHPFLVMSRGDTAQYSDLNKLAKRFLGGKSCGLEKEGKDVLPSVAFVQEVVEELSKGEQGECPICLEAFEDAVLTPCAHRLCRECLLASWRNSSSGLCPVCRKTVSKQELITAPTESRFQVDVEKNWVESSKITALLEELESFRSSGSKSIIFSQWTAFLDLLQIPLSRNNISFVRLDGTLNQQQREKVLKEFSEDGSIMVMLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIIKGTVEERMEAVQARKQRMISGALTDQEVRSARIEELKMLFT